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Eigenvector Research Inc pls toolbox 8 9 2
Pls Toolbox 8 9 2, supplied by Eigenvector Research Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/pls+toolbox/pls+toolbox/pmc13164873-218-16-18
Average 86 stars, based on 1 article reviews
pls toolbox 8 9 2 - by Bioz Stars, 2026-09
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Article Title: Feasibility assessment of a low-cost near-infrared spectroscopy-based prototype for monitoring polyphenol extraction in fermenting musts.
Article Snippet: Multivariate computations were performed in MATLAB R2013a (MathWorks, Natick, MA, USA) and PLS Toolbox (Eigenvector Research, Inc., Manson, WA, USA).

Article Title: Surface-Enhanced Raman Spectroscopy on Gold Nanoparticle for Sperm Quality Discrimination.
Article Snippet: The spectra were preprocessed by baseline removal, following Standard Normal Variate scaling (SNV); modeling and preprocessing were conducted using the PLS Toolbox version 7.5.2 (Eigenvector Research Inc., Wenatchee, WA, USA) with the MATLAB R2016b version 7 platform (MathWorks, Natick, MA, USA).

Article Title: Sustainable valorization of citrus by-products: natural deep eutectic solvents for bioactive extraction and biological applications of Citrus sinensis peel
Article Snippet: Data exploration was performed in the MATLAB environment (v. 2017b, Mathworks, Inc., Natick, MA, USA) using the PLS toolbox (v. 8.5, Eigenvector Research, Inc., Seattle, WA, USA).

Article Title: Multiparameter Modeling for 10 Crude Oil Properties Using Comprehensive Two-Dimensional Gas Chromatography and Pixel-Based Chemometrics
Article Snippet: PLS Toolbox (eigenvector Research, Inc., Manson, WA, USA) was used to build multivariate regression models.

Article Title: Enhancing Vibrational Spectroscopy-Based Diagnosis through Bottom-Up Modeling: The Case of Infrared Absorption Spectrum of Urine
Article Snippet: Spectral generation, data visualization, and analysis were carried out in MATLAB 2024a (MathWorks Inc., Natick, USA) using in-house written scripts and the PLS Toolbox (Eigenvector Research Inc., Manson, USA).

Article Title: Interaction effects of fumaric acid, pH and ethanol on the growth of lactic and acetic acid bacteria in planktonic and biofilm states.
Article Snippet: The microbial stability of wine can be compromised by the presence of lactic acid bacteria (LAB) and acetic acid bacteria (AAB), which can cause spoilage via off flavour production, increased acetic acid production, or biofilm formation.. To manage the growth of LAB in winemaking, fumaric acid (FA) has been proposed as an alternative to traditional antimicrobial agents, such as sulfur dioxide (SO2).. This study aimed to evaluate the inhibitory effects of FA on the growth of LAB and AAB based on the influence of pH and ethanol in a synthetic wine-like

Generated:

Article Title: Explosives Analysis Using Thin-Layer Chromatography-Quantum Cascade Laser Spectroscopy.
Article Snippet: .. All the spectra were stored in Thermo-Galactic SPC format (Thermo Fisher Scientific, Inc., Madison, WI, USA) and analyzed using PLS and PLS-DA chemometric models generated using the PLS Toolbox, v. 8.1 (Eigenvector Research Inc., Manson, WA, USA) for Molecules 2025, 30, 1844 14 of 17 MATLAB (The MathWorks, Inc., Natick, MA, USA). ..

Spectroscopy:

Article Title: Oil ingestion and genotoxic biomarkers in three swimming crab species (Decapoda, Portunidae) from tropical estuaries affected by oil spills.
Article Snippet: .. Statistical analyses of spectroscopy Raman were performed in MATLAB ambient (MATLAB® R2010a 7.10.0.499, MathWorks), using the PLS toolbox (Eigenvector Research Inc., USA). ..



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Study schematic. ( A ) Univariate associations between FC matrices <t>and</t> <t>MBI</t> diagnosis, MBI-C total score or MBI-C subdomain score were examined using separate linear regression models, with age, sex, years of education, diagnosis and total intracranial volumes included as nuisance covariates. ( B ) In parallel, <t>partial</t> <t>least</t> <t>squares</t> correlation was conducted to examine multivariate associations between residuals of FC matrices and MBI-C subdomain scores after regressing out age, sex, years of education, diagnosis and total intracranial volumes. This approach gives rise to a set of latent variables, which are linear weighted combinations of the original variables (i.e., FC and MBI-C score loadings) that have maximal covariance with each other. Individual connectome scores and MBI-C scores were then obtained by back projecting the FC and MBI-C score loadings to their original residual values. Connectome scores describe the extent to which each participant expresses the FC pattern maximally associated with the MBI-C scores, with higher connectome scores indicating greater MBI-related functional network disruptions. ( C ) Subsequently, we examined whether connectome score or MBI-C total score interacted with global amyloid SUVR and temporal meta-ROI tau SUVR to influence baseline and rate of change in global cognition and functional performance using linear regression models. MBI-C = Mild Behavioural Impairment Checklist; MBI-C = Mild Behavioural Impairment Checklist; SUVR = standardized uptake value ratio; ROI = region-of-interest; FC = functional connectivity; AD = Alzheimer’s disease; CDR = Clinical Dementia Rating; MoCA = Montreal Cognitive Assessment
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Study schematic. ( A ) Univariate associations between FC matrices <t>and</t> <t>MBI</t> diagnosis, MBI-C total score or MBI-C subdomain score were examined using separate linear regression models, with age, sex, years of education, diagnosis and total intracranial volumes included as nuisance covariates. ( B ) In parallel, <t>partial</t> <t>least</t> <t>squares</t> correlation was conducted to examine multivariate associations between residuals of FC matrices and MBI-C subdomain scores after regressing out age, sex, years of education, diagnosis and total intracranial volumes. This approach gives rise to a set of latent variables, which are linear weighted combinations of the original variables (i.e., FC and MBI-C score loadings) that have maximal covariance with each other. Individual connectome scores and MBI-C scores were then obtained by back projecting the FC and MBI-C score loadings to their original residual values. Connectome scores describe the extent to which each participant expresses the FC pattern maximally associated with the MBI-C scores, with higher connectome scores indicating greater MBI-related functional network disruptions. ( C ) Subsequently, we examined whether connectome score or MBI-C total score interacted with global amyloid SUVR and temporal meta-ROI tau SUVR to influence baseline and rate of change in global cognition and functional performance using linear regression models. MBI-C = Mild Behavioural Impairment Checklist; MBI-C = Mild Behavioural Impairment Checklist; SUVR = standardized uptake value ratio; ROI = region-of-interest; FC = functional connectivity; AD = Alzheimer’s disease; CDR = Clinical Dementia Rating; MoCA = Montreal Cognitive Assessment
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Study schematic. ( A ) Univariate associations between FC matrices and MBI diagnosis, MBI-C total score or MBI-C subdomain score were examined using separate linear regression models, with age, sex, years of education, diagnosis and total intracranial volumes included as nuisance covariates. ( B ) In parallel, partial least squares correlation was conducted to examine multivariate associations between residuals of FC matrices and MBI-C subdomain scores after regressing out age, sex, years of education, diagnosis and total intracranial volumes. This approach gives rise to a set of latent variables, which are linear weighted combinations of the original variables (i.e., FC and MBI-C score loadings) that have maximal covariance with each other. Individual connectome scores and MBI-C scores were then obtained by back projecting the FC and MBI-C score loadings to their original residual values. Connectome scores describe the extent to which each participant expresses the FC pattern maximally associated with the MBI-C scores, with higher connectome scores indicating greater MBI-related functional network disruptions. ( C ) Subsequently, we examined whether connectome score or MBI-C total score interacted with global amyloid SUVR and temporal meta-ROI tau SUVR to influence baseline and rate of change in global cognition and functional performance using linear regression models. MBI-C = Mild Behavioural Impairment Checklist; MBI-C = Mild Behavioural Impairment Checklist; SUVR = standardized uptake value ratio; ROI = region-of-interest; FC = functional connectivity; AD = Alzheimer’s disease; CDR = Clinical Dementia Rating; MoCA = Montreal Cognitive Assessment

Journal: Alzheimer's Research & Therapy

Article Title: Functional network phenotypes of mild behavioural impairment: cognitive effects moderated by amyloid

doi: 10.1186/s13195-026-01980-2

Figure Lengend Snippet: Study schematic. ( A ) Univariate associations between FC matrices and MBI diagnosis, MBI-C total score or MBI-C subdomain score were examined using separate linear regression models, with age, sex, years of education, diagnosis and total intracranial volumes included as nuisance covariates. ( B ) In parallel, partial least squares correlation was conducted to examine multivariate associations between residuals of FC matrices and MBI-C subdomain scores after regressing out age, sex, years of education, diagnosis and total intracranial volumes. This approach gives rise to a set of latent variables, which are linear weighted combinations of the original variables (i.e., FC and MBI-C score loadings) that have maximal covariance with each other. Individual connectome scores and MBI-C scores were then obtained by back projecting the FC and MBI-C score loadings to their original residual values. Connectome scores describe the extent to which each participant expresses the FC pattern maximally associated with the MBI-C scores, with higher connectome scores indicating greater MBI-related functional network disruptions. ( C ) Subsequently, we examined whether connectome score or MBI-C total score interacted with global amyloid SUVR and temporal meta-ROI tau SUVR to influence baseline and rate of change in global cognition and functional performance using linear regression models. MBI-C = Mild Behavioural Impairment Checklist; MBI-C = Mild Behavioural Impairment Checklist; SUVR = standardized uptake value ratio; ROI = region-of-interest; FC = functional connectivity; AD = Alzheimer’s disease; CDR = Clinical Dementia Rating; MoCA = Montreal Cognitive Assessment

Article Snippet: Behaviour partial least squares correlation was then performed on the standardized FC and MBI-C subdomain score residuals using the PLS toolbox [ ] in MATLAB.

Techniques: Biomarker Discovery, Functional Assay

The presence and severity of MBI are associated with whole-brain FC dysfunctions. ( A ) FC matrix (left) displays significant bootstrap ratios (> 2) of functional connections corresponding to this latent variable, while bar chart (right) displays the mean correlation values between connectome scores of this latent variable and each of the MBI-C subdomain scores (error bars denote 95% bootstrapped confidence intervals). Partial least squares correlation analysis identified one significant latent variable that explained 68.0% of covariance between FC and MBI-C subdomain scores. The latent variable was characterized by high scores across all MBI-C subdomains, indicating global, rather than domain-specific effects of MBI on brain functional networks. Further, the latent variable was associated with whole-brain FC dysfunction between and within networks, particularly in the higher-order default, control and salience/ventral attention networks. ( B-C ) FC matrices display the T-scores of functional connections showing significant (uncorrected P < 0.05) associations (hot colour: positive association; cool colour: negative association) with ( B ) MBI-C total score and ( C ) MBI diagnosis. Both higher MBI-C total score and MBI positivity were associated with widespread within- and between- network FC disruptions notably in higher-order networks, recapitulating the FC dysfunction pattern observed in the partial least squares correlation analysis. MBI = Mild Behavioural Impairment; FC = functional connectivity; MBI-C = Mild Behavioural Impairment Checklist; SalVentAttn = salience/ventral attention; DorsalAttn = dorsal attention; SomMot = somatomotor; TempPar = temporoparietal

Journal: Alzheimer's Research & Therapy

Article Title: Functional network phenotypes of mild behavioural impairment: cognitive effects moderated by amyloid

doi: 10.1186/s13195-026-01980-2

Figure Lengend Snippet: The presence and severity of MBI are associated with whole-brain FC dysfunctions. ( A ) FC matrix (left) displays significant bootstrap ratios (> 2) of functional connections corresponding to this latent variable, while bar chart (right) displays the mean correlation values between connectome scores of this latent variable and each of the MBI-C subdomain scores (error bars denote 95% bootstrapped confidence intervals). Partial least squares correlation analysis identified one significant latent variable that explained 68.0% of covariance between FC and MBI-C subdomain scores. The latent variable was characterized by high scores across all MBI-C subdomains, indicating global, rather than domain-specific effects of MBI on brain functional networks. Further, the latent variable was associated with whole-brain FC dysfunction between and within networks, particularly in the higher-order default, control and salience/ventral attention networks. ( B-C ) FC matrices display the T-scores of functional connections showing significant (uncorrected P < 0.05) associations (hot colour: positive association; cool colour: negative association) with ( B ) MBI-C total score and ( C ) MBI diagnosis. Both higher MBI-C total score and MBI positivity were associated with widespread within- and between- network FC disruptions notably in higher-order networks, recapitulating the FC dysfunction pattern observed in the partial least squares correlation analysis. MBI = Mild Behavioural Impairment; FC = functional connectivity; MBI-C = Mild Behavioural Impairment Checklist; SalVentAttn = salience/ventral attention; DorsalAttn = dorsal attention; SomMot = somatomotor; TempPar = temporoparietal

Article Snippet: Behaviour partial least squares correlation was then performed on the standardized FC and MBI-C subdomain score residuals using the PLS toolbox [ ] in MATLAB.

Techniques: Functional Assay, Control, Biomarker Discovery